Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.22■□□□□ 0.83
KPNA4O00629 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.22■□□□□ 0.83
KPNA4O00629 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KPNA4O00629 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KPNA4O00629 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 AC242852.2-201ENST00000615738 1807 ntBASIC20.22■□□□□ 0.83
KPNA4O00629 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KPNA4O00629 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.21■□□□□ 0.83
KPNA4O00629 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KPNA4O00629 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
KPNA4O00629 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KPNA4O00629 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KPNA4O00629 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 AC009299.2-201ENST00000482477 511 ntBASIC20.21■□□□□ 0.83
KPNA4O00629 Z92544.1-202ENST00000571933 1220 ntBASIC20.21■□□□□ 0.83
KPNA4O00629 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KPNA4O00629 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.21■□□□□ 0.83
KPNA4O00629 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KPNA4O00629 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KPNA4O00629 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KPNA4O00629 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KPNA4O00629 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
KPNA4O00629 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.2■□□□□ 0.82
KPNA4O00629 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.2■□□□□ 0.82
KPNA4O00629 AL451085.2-201ENST00000605085 799 ntBASIC20.2■□□□□ 0.82
KPNA4O00629 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.2■□□□□ 0.82
KPNA4O00629 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KPNA4O00629 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KPNA4O00629 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KPNA4O00629 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.19■□□□□ 0.82
KPNA4O00629 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KPNA4O00629 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KPNA4O00629 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KPNA4O00629 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.19■□□□□ 0.82
KPNA4O00629 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
KPNA4O00629 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
KPNA4O00629 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.19■□□□□ 0.82
KPNA4O00629 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KPNA4O00629 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KPNA4O00629 LINC01529-204ENST00000636474 1715 ntBASIC20.19■□□□□ 0.82
KPNA4O00629 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.18■□□□□ 0.82
KPNA4O00629 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.18■□□□□ 0.82
KPNA4O00629 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.18■□□□□ 0.82
KPNA4O00629 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.18■□□□□ 0.82
KPNA4O00629 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KPNA4O00629 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
KPNA4O00629 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KPNA4O00629 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KPNA4O00629 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KPNA4O00629 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.17■□□□□ 0.82
KPNA4O00629 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KPNA4O00629 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KPNA4O00629 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.17■□□□□ 0.82
KPNA4O00629 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.17■□□□□ 0.82
KPNA4O00629 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KPNA4O00629 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
KPNA4O00629 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KPNA4O00629 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KPNA4O00629 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KPNA4O00629 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.16■□□□□ 0.82
KPNA4O00629 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KPNA4O00629 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms