Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MEIS3P1A6NDR6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 AF106564.1-201ENST00000607058 2553 ntBASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 MIR4281-201ENST00000580852 62 ntBASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MEIS3P1A6NDR6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MEIS3P1A6NDR6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.58■□□□□ 0.56
MEIS3P1A6NDR6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MEIS3P1A6NDR6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
MEIS3P1A6NDR6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 AL157384.1-201ENST00000445995 2473 ntBASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 DUX4L18-201ENST00000553347 1267 ntBASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MEIS3P1A6NDR6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 AC244015.2-201ENST00000616358 1861 ntBASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MEIS3P1A6NDR6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 KRT18P60-201ENST00000312876 1297 ntBASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 THA1P-201ENST00000590384 1145 ntBASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 AC019171.1-201ENST00000601251 1056 ntBASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MEIS3P1A6NDR6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MEIS3P1A6NDR6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms