Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC1A1P43005 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC13.19□□□□□ -0.3
SLC1A1P43005 AC023968.2-201ENST00000560593 1049 ntBASIC13.19□□□□□ -0.3
SLC1A1P43005 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.19□□□□□ -0.3
SLC1A1P43005 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC13.19□□□□□ -0.3
SLC1A1P43005 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 HIPK1-AS1-204ENST00000450706 2117 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SLC1A1P43005 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 NTM-221ENST00000539799 2550 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC1A1P43005 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC1A1P43005 TYRO3P-201ENST00000558165 2705 ntBASIC13.19□□□□□ -0.3
SLC1A1P43005 UBA3-203ENST00000415609 2004 ntTSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC1A1P43005 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC1A1P43005 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
SLC1A1P43005 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC1A1P43005 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC1A1P43005 RPL17P34-201ENST00000394133 555 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC1A1P43005 SLC25A6P3-201ENST00000424829 879 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC1A1P43005 RNASEH2CP1-201ENST00000454281 502 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 AC069181.1-201ENST00000498256 554 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC1A1P43005 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC1A1P43005 AC068831.5-201ENST00000557387 328 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 DGAT2L7P-201ENST00000602462 744 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 AC136475.7-201ENST00000602949 592 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 FP671120.4-201ENST00000629969 923 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC1A1P43005 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SLC1A1P43005 KIAA1024L-201ENST00000564719 2354 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC1A1P43005 IQCD-202ENST00000416617 1673 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SLC1A1P43005 DDO-201ENST00000368923 1953 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC1A1P43005 MRPL22-207ENST00000523037 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC1A1P43005 PPP1R26P1-201ENST00000474415 3613 ntBASIC13.18□□□□□ -0.3
SLC1A1P43005 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 AC023830.3-201ENST00000612995 1455 ntBASIC13.17□□□□□ -0.3
SLC1A1P43005 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 EEF2KMT-202ENST00000458008 2268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.17□□□□□ -0.3
SLC1A1P43005 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SLC1A1P43005 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC13.17□□□□□ -0.3
SLC1A1P43005 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC13.17□□□□□ -0.3
SLC1A1P43005 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
SLC1A1P43005 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.17□□□□□ -0.3
SLC1A1P43005 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC1A1P43005 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.17□□□□□ -0.3
SLC1A1P43005 RN7SL718P-201ENST00000581254 303 ntBASIC13.17□□□□□ -0.3
SLC1A1P43005 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC13.17□□□□□ -0.3
SLC1A1P43005 AC087893.1-201ENST00000612818 664 ntBASIC13.17□□□□□ -0.3
SLC1A1P43005 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SLC1A1P43005 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms