Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 AC091807.1-201ENST00000418838 1544 ntBASIC12.55□□□□□ -0.4
SATB2Q9UPW6 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.55□□□□□ -0.4
SATB2Q9UPW6 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 AC106820.4-201ENST00000561847 5616 ntBASIC12.55□□□□□ -0.4
SATB2Q9UPW6 LPP-AS2-201ENST00000605573 2852 ntBASIC12.55□□□□□ -0.4
SATB2Q9UPW6 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.55□□□□□ -0.4
SATB2Q9UPW6 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 IMPDH1P5-201ENST00000439688 1540 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 DDX12P-201ENST00000432996 2947 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC069421.1-201ENST00000447462 323 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC104759.1-201ENST00000559109 939 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 MIR4539-201ENST00000579784 60 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CDIPT-AS1-203ENST00000638164 713 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AL450468.2-201ENST00000565955 1889 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC104590.1-202ENST00000558368 1921 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 AC027369.3-201ENST00000530465 3707 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 Z98259.1-201ENST00000564261 1697 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SATB2Q9UPW6 LINC00563-201ENST00000566370 1400 ntBASIC12.54□□□□□ -0.4
SATB2Q9UPW6 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SATB2Q9UPW6 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms