Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC12.05□□□□□ -0.48
SCN2BO60939 KRT8P30-201ENST00000432100 650 ntBASIC12.05□□□□□ -0.48
SCN2BO60939 RN7SL789P-201ENST00000478944 293 ntBASIC12.05□□□□□ -0.48
SCN2BO60939 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 AC104117.1-201ENST00000517817 900 ntBASIC12.05□□□□□ -0.48
SCN2BO60939 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC12.05□□□□□ -0.48
SCN2BO60939 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 PKMP1-201ENST00000455804 1523 ntBASIC12.05□□□□□ -0.48
SCN2BO60939 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC12.05□□□□□ -0.48
SCN2BO60939 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCN2BO60939 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC12.05□□□□□ -0.48
SCN2BO60939 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
SCN2BO60939 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
SCN2BO60939 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SCN2BO60939 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 HERC2P9-206ENST00000529624 5187 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 PARK7-204ENST00000377493 795 ntTSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC12.04□□□□□ -0.48
SCN2BO60939 AC098934.2-202ENST00000438944 1033 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 DUX4L31-201ENST00000446466 1136 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 AL136084.1-201ENST00000449172 318 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 BCL2L12P1-201ENST00000508390 733 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC12.04□□□□□ -0.48
SCN2BO60939 TREHP1-201ENST00000531328 465 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 TYMSP2-201ENST00000589501 424 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SCN2BO60939 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SCN2BO60939 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC12.04□□□□□ -0.48
SCN2BO60939 AL132656.4-201ENST00000623504 2122 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCN2BO60939 GOLGA2P1-201ENST00000512938 2906 ntBASIC12.04□□□□□ -0.48
SCN2BO60939 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 PTPN6-201ENST00000318974 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 AR-202ENST00000396043 1728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 MPI-208ENST00000563786 1707 ntTSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 C1S-221ENST00000617865 2844 ntTSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 LILRA2-202ENST00000251377 1799 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 ABHD17B-201ENST00000333421 2614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms