Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 OR2I1P-207ENST00000453522 948 ntBASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 AL354811.1-201ENST00000610286 706 ntBASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA6Q9Y5G7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 AC092068.2-201ENST00000590491 1708 ntBASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA6Q9Y5G7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDHGA6Q9Y5G7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 AC012414.1-201ENST00000556676 535 ntBASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 AL031602.1-201ENST00000633169 911 ntBASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHGA6Q9Y5G7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 KRT18P5-201ENST00000436075 1291 ntBASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA6Q9Y5G7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4L2-201ENST00000561772 1275 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 AC022517.1-201ENST00000592429 346 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4L6-201ENST00000626483 1275 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4L1-201ENST00000627662 1275 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4L8-201ENST00000629013 1275 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4L3-201ENST00000630187 1275 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4L7-201ENST00000630678 1275 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 DUX4L5-201ENST00000630834 1275 ntBASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGA6Q9Y5G7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA6Q9Y5G7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms