Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
DKK4Q9UBT3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DKK4Q9UBT3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DKK4Q9UBT3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
DKK4Q9UBT3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DKK4Q9UBT3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DKK4Q9UBT3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 SLC7A5P1-201ENST00000568957 537 ntBASIC20.6■□□□□ 0.89
DKK4Q9UBT3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DKK4Q9UBT3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.59■□□□□ 0.89
DKK4Q9UBT3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DKK4Q9UBT3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 AL596275.1-201ENST00000423464 877 ntBASIC20.58■□□□□ 0.89
DKK4Q9UBT3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.58■□□□□ 0.89
DKK4Q9UBT3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.58■□□□□ 0.88
DKK4Q9UBT3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.58■□□□□ 0.88
DKK4Q9UBT3 AC005224.4-201ENST00000583262 1652 ntBASIC20.58■□□□□ 0.88
DKK4Q9UBT3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 AC009237.3-201ENST00000393279 1427 ntBASIC20.57■□□□□ 0.88
DKK4Q9UBT3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 AP001160.3-201ENST00000601484 763 ntBASIC20.57■□□□□ 0.88
DKK4Q9UBT3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DKK4Q9UBT3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 MIPEPP3-201ENST00000412105 444 ntBASIC20.56■□□□□ 0.88
DKK4Q9UBT3 RPS2P4-201ENST00000476944 856 ntBASIC20.56■□□□□ 0.88
DKK4Q9UBT3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DKK4Q9UBT3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 KRT18P20-201ENST00000548986 1279 ntBASIC20.55■□□□□ 0.88
DKK4Q9UBT3 AC092118.2-201ENST00000613495 667 ntBASIC20.55■□□□□ 0.88
DKK4Q9UBT3 AC010536.3-201ENST00000620306 533 ntBASIC20.55■□□□□ 0.88
DKK4Q9UBT3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DKK4Q9UBT3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms