Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COMMD9Q9P000 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD9Q9P000 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COMMD9Q9P000 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD9Q9P000 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD9Q9P000 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD9Q9P000 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD9Q9P000 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD9Q9P000 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD9Q9P000 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD9Q9P000 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COMMD9Q9P000 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD9Q9P000 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COMMD9Q9P000 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD9Q9P000 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD9Q9P000 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD9Q9P000 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD9Q9P000 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD9Q9P000 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD9Q9P000 AC129492.7-201ENST00000622992 756 ntBASIC18.48■□□□□ 0.55
COMMD9Q9P000 AC092667.1-201ENST00000434301 2586 ntBASIC18.48■□□□□ 0.55
COMMD9Q9P000 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD9Q9P000 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD9Q9P000 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
COMMD9Q9P000 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD9Q9P000 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD9Q9P000 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD9Q9P000 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD9Q9P000 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD9Q9P000 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD9Q9P000 AC022616.5-201ENST00000518796 181 ntBASIC18.47■□□□□ 0.55
COMMD9Q9P000 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD9Q9P000 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD9Q9P000 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD9Q9P000 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD9Q9P000 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COMMD9Q9P000 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
COMMD9Q9P000 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD9Q9P000 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
COMMD9Q9P000 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD9Q9P000 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD9Q9P000 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD9Q9P000 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
COMMD9Q9P000 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD9Q9P000 U85056.1-201ENST00000616429 682 ntBASIC18.46■□□□□ 0.55
COMMD9Q9P000 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD9Q9P000 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD9Q9P000 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD9Q9P000 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD9Q9P000 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
COMMD9Q9P000 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 AC019171.1-201ENST00000601251 1056 ntBASIC18.45■□□□□ 0.54
COMMD9Q9P000 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.45■□□□□ 0.54
COMMD9Q9P000 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD9Q9P000 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COMMD9Q9P000 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.44■□□□□ 0.54
COMMD9Q9P000 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COMMD9Q9P000 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD9Q9P000 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.44■□□□□ 0.54
COMMD9Q9P000 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COMMD9Q9P000 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms