Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 REXO1L12P-201ENST00000622156 912 ntBASIC20.71■□□□□ 0.91
CHD8Q9HCK8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 SLC6A10P-202ENST00000431994 2058 ntBASIC20.7■□□□□ 0.9
CHD8Q9HCK8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHD8Q9HCK8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 SNORA78-201ENST00000459373 127 ntBASIC20.69■□□□□ 0.9
CHD8Q9HCK8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHD8Q9HCK8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 MIPEPP3-201ENST00000412105 444 ntBASIC20.68■□□□□ 0.9
CHD8Q9HCK8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHD8Q9HCK8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.67■□□□□ 0.9
CHD8Q9HCK8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 BX276092.2-201ENST00000417668 665 ntBASIC20.66■□□□□ 0.9
CHD8Q9HCK8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.66■□□□□ 0.9
CHD8Q9HCK8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.66■□□□□ 0.9
CHD8Q9HCK8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 AP001160.3-201ENST00000601484 763 ntBASIC20.65■□□□□ 0.9
CHD8Q9HCK8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms