Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 SYT6-210ENST00000641643 1587 ntBASIC21.4■■□□□ 1.02
PDLIM5Q96HC4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDLIM5Q96HC4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDLIM5Q96HC4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PDLIM5Q96HC4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.39■■□□□ 1.02
PDLIM5Q96HC4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.39■■□□□ 1.02
PDLIM5Q96HC4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 SERBP1P1-201ENST00000396021 1160 ntBASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PDLIM5Q96HC4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 AC011298.3-201ENST00000615796 283 ntBASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM5Q96HC4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 AC136469.2-201ENST00000623944 1028 ntBASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM5Q96HC4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 AC079089.2-201ENST00000531211 1277 ntBASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM5Q96HC4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM5Q96HC4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM5Q96HC4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM5Q96HC4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.34■■□□□ 1.01
PDLIM5Q96HC4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.34■■□□□ 1.01
PDLIM5Q96HC4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM5Q96HC4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.34■■□□□ 1.01
PDLIM5Q96HC4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.34■■□□□ 1.01
PDLIM5Q96HC4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms