Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40AQ8WXH6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 AC026310.3-201ENST00000625186 2373 ntBASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 SNX5-217ENST00000606557 1087 ntBASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RAB40AQ8WXH6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 AC008406.3-201ENST00000620001 1374 ntBASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 MIR6722-201ENST00000617286 78 ntBASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40AQ8WXH6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 AC087742.1-201ENST00000575880 1738 ntBASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40AQ8WXH6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40AQ8WXH6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40AQ8WXH6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 AL356740.2-201ENST00000601559 647 ntBASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40AQ8WXH6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 SLC25A24-204ENST00000569674 2357 ntBASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40AQ8WXH6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 AC004448.1-201ENST00000458332 883 ntBASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 MIR3621-201ENST00000580529 85 ntBASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 AL117332.1-201ENST00000622628 974 ntBASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40AQ8WXH6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms