Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 AC005224.4-201ENST00000583262 1652 ntBASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 AL596275.1-201ENST00000423464 877 ntBASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
CHMP7Q8WUX9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC36.04■■■■□ 3.36
CHMP7Q8WUX9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC36.04■■■■□ 3.36
CHMP7Q8WUX9 GCSHP5-201ENST00000443090 522 ntBASIC36.04■■■■□ 3.36
CHMP7Q8WUX9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC36.04■■■■□ 3.36
CHMP7Q8WUX9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC36.04■■■■□ 3.36
CHMP7Q8WUX9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 AP001160.3-201ENST00000601484 763 ntBASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 AC004687.1-201ENST00000579003 1625 ntBASIC36.03■■■■□ 3.36
CHMP7Q8WUX9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
CHMP7Q8WUX9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
CHMP7Q8WUX9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC36.02■■■■□ 3.36
CHMP7Q8WUX9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC36.02■■■■□ 3.36
CHMP7Q8WUX9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC36.02■■■■□ 3.36
CHMP7Q8WUX9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC36.02■■■■□ 3.36
CHMP7Q8WUX9 OXCT2P1-201ENST00000447263 1535 ntBASIC36.02■■■■□ 3.36
CHMP7Q8WUX9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
CHMP7Q8WUX9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
CHMP7Q8WUX9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC36.01■■■■□ 3.36
CHMP7Q8WUX9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
CHMP7Q8WUX9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC36■■■■□ 3.35
CHMP7Q8WUX9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CHMP7Q8WUX9 PPP1R14BP2-201ENST00000426284 444 ntBASIC36■■■■□ 3.35
CHMP7Q8WUX9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC36■■■■□ 3.35
CHMP7Q8WUX9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC36■■■■□ 3.35
CHMP7Q8WUX9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC36■■■■□ 3.35
CHMP7Q8WUX9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CHMP7Q8WUX9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 MIPEPP3-201ENST00000412105 444 ntBASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC35.99■■■■□ 3.35
CHMP7Q8WUX9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC35.98■■■■□ 3.35
CHMP7Q8WUX9 MARS-234ENST00000630571 216 ntTSL 5 BASIC35.98■■■■□ 3.35
CHMP7Q8WUX9 MARS-235ENST00000630803 183 ntTSL 3 BASIC35.98■■■■□ 3.35
CHMP7Q8WUX9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC35.98■■■■□ 3.35
CHMP7Q8WUX9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC35.98■■■■□ 3.35
CHMP7Q8WUX9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC35.97■■■■□ 3.35
CHMP7Q8WUX9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
CHMP7Q8WUX9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CHMP7Q8WUX9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC35.97■■■■□ 3.35
CHMP7Q8WUX9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
CHMP7Q8WUX9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC35.97■■■■□ 3.35
CHMP7Q8WUX9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 RARRES2P4-201ENST00000514074 484 ntBASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 AC010536.3-201ENST00000620306 533 ntBASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CHMP7Q8WUX9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 AC135731.1-201ENST00000569415 2548 ntBASIC35.95■■■■□ 3.35
CHMP7Q8WUX9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.34
CHMP7Q8WUX9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC35.94■■■■□ 3.34
CHMP7Q8WUX9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC35.94■■■■□ 3.34
CHMP7Q8WUX9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
CHMP7Q8WUX9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC35.94■■■■□ 3.34
CHMP7Q8WUX9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CHMP7Q8WUX9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHMP7Q8WUX9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHMP7Q8WUX9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHMP7Q8WUX9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CHMP7Q8WUX9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHMP7Q8WUX9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHMP7Q8WUX9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC35.92■■■■□ 3.34
CHMP7Q8WUX9 ADM-205ENST00000528544 586 ntTSL 2 BASIC35.92■■■■□ 3.34
CHMP7Q8WUX9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CHMP7Q8WUX9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CHMP7Q8WUX9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CHMP7Q8WUX9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CHMP7Q8WUX9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CHMP7Q8WUX9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC35.91■■■■□ 3.34
CHMP7Q8WUX9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC35.91■■■■□ 3.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms