Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.7■■□□□ 1.06
RAB3IL1Q8TBN0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB3IL1Q8TBN0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.69■■□□□ 1.06
RAB3IL1Q8TBN0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RAB3IL1Q8TBN0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RAB3IL1Q8TBN0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB3IL1Q8TBN0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB3IL1Q8TBN0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB3IL1Q8TBN0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAB3IL1Q8TBN0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 AC139795.1-202ENST00000500444 432 ntBASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 AC012354.3-201ENST00000623734 483 ntBASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB3IL1Q8TBN0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 LINC01529-204ENST00000636474 1715 ntBASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 FP325331.1-202ENST00000623531 1380 ntBASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB3IL1Q8TBN0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 LINC01960-201ENST00000563759 1884 ntBASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB3IL1Q8TBN0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB3IL1Q8TBN0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RAB3IL1Q8TBN0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 AC244015.2-201ENST00000616358 1861 ntBASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 KRT18P60-201ENST00000312876 1297 ntBASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB3IL1Q8TBN0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB3IL1Q8TBN0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms