Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC00311Q8N616 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LINC00311Q8N616 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 BX842568.3-201ENST00000418104 571 ntBASIC17.74■□□□□ 0.43
LINC00311Q8N616 SLC47A1P1-202ENST00000449666 945 ntBASIC17.74■□□□□ 0.43
LINC00311Q8N616 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC00311Q8N616 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.74■□□□□ 0.43
LINC00311Q8N616 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC00311Q8N616 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00311Q8N616 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00311Q8N616 AC135279.3-201ENST00000610945 1311 ntBASIC17.73■□□□□ 0.43
LINC00311Q8N616 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00311Q8N616 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00311Q8N616 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00311Q8N616 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00311Q8N616 AC024257.2-201ENST00000549699 147 ntBASIC17.73■□□□□ 0.43
LINC00311Q8N616 MIR4767-201ENST00000582827 78 ntBASIC17.73■□□□□ 0.43
LINC00311Q8N616 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00311Q8N616 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00311Q8N616 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LINC00311Q8N616 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00311Q8N616 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC00311Q8N616 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00311Q8N616 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC00311Q8N616 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00311Q8N616 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00311Q8N616 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC00311Q8N616 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.72■□□□□ 0.43
LINC00311Q8N616 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC00311Q8N616 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00311Q8N616 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LINC00311Q8N616 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00311Q8N616 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00311Q8N616 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00311Q8N616 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00311Q8N616 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00311Q8N616 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00311Q8N616 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00311Q8N616 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00311Q8N616 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 AC096631.2-201ENST00000436136 790 ntBASIC17.71■□□□□ 0.43
LINC00311Q8N616 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.71■□□□□ 0.43
LINC00311Q8N616 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00311Q8N616 OXCT2P1-201ENST00000447263 1535 ntBASIC17.71■□□□□ 0.43
LINC00311Q8N616 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00311Q8N616 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LINC00311Q8N616 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.7■□□□□ 0.42
LINC00311Q8N616 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LINC00311Q8N616 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.7■□□□□ 0.42
LINC00311Q8N616 AC106739.1-201ENST00000617035 715 ntBASIC17.7■□□□□ 0.42
LINC00311Q8N616 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.7■□□□□ 0.42
LINC00311Q8N616 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
LINC00311Q8N616 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00311Q8N616 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00311Q8N616 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LINC00311Q8N616 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00311Q8N616 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
LINC00311Q8N616 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC00311Q8N616 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00311Q8N616 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00311Q8N616 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00311Q8N616 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC00311Q8N616 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
LINC00311Q8N616 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.69■□□□□ 0.42
LINC00311Q8N616 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 365.8 ms