Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 AL139125.2-201ENST00000623134 1869 ntBASIC23.62■■□□□ 1.37
LRRC43Q8N309 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LRRC43Q8N309 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC43Q8N309 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC43Q8N309 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC43Q8N309 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC43Q8N309 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.61■■□□□ 1.37
LRRC43Q8N309 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC43Q8N309 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRC43Q8N309 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
LRRC43Q8N309 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
LRRC43Q8N309 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.6■■□□□ 1.37
LRRC43Q8N309 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
LRRC43Q8N309 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.6■■□□□ 1.37
LRRC43Q8N309 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC43Q8N309 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.59■■□□□ 1.37
LRRC43Q8N309 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC43Q8N309 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC43Q8N309 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC43Q8N309 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC43Q8N309 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.59■■□□□ 1.37
LRRC43Q8N309 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.59■■□□□ 1.37
LRRC43Q8N309 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.59■■□□□ 1.37
LRRC43Q8N309 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC43Q8N309 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LRRC43Q8N309 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC43Q8N309 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC43Q8N309 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.58■■□□□ 1.37
LRRC43Q8N309 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.58■■□□□ 1.37
LRRC43Q8N309 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LRRC43Q8N309 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.58■■□□□ 1.37
LRRC43Q8N309 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LRRC43Q8N309 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.58■■□□□ 1.36
LRRC43Q8N309 OXCT2P1-201ENST00000447263 1535 ntBASIC23.58■■□□□ 1.36
LRRC43Q8N309 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC43Q8N309 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.57■■□□□ 1.36
LRRC43Q8N309 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC43Q8N309 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC43Q8N309 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC43Q8N309 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.57■■□□□ 1.36
LRRC43Q8N309 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
LRRC43Q8N309 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
LRRC43Q8N309 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC43Q8N309 KRT19P1-201ENST00000405746 1186 ntBASIC23.57■■□□□ 1.36
LRRC43Q8N309 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.57■■□□□ 1.36
LRRC43Q8N309 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.57■■□□□ 1.36
LRRC43Q8N309 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.57■■□□□ 1.36
LRRC43Q8N309 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRC43Q8N309 ABCB10P4-201ENST00000566803 2184 ntBASIC23.57■■□□□ 1.36
LRRC43Q8N309 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC43Q8N309 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.56■■□□□ 1.36
LRRC43Q8N309 HLA-L-209ENST00000420110 1011 ntBASIC23.56■■□□□ 1.36
LRRC43Q8N309 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC43Q8N309 AC073111.5-205ENST00000641717 521 ntBASIC23.56■■□□□ 1.36
LRRC43Q8N309 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRC43Q8N309 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC43Q8N309 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC43Q8N309 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC43Q8N309 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRRC43Q8N309 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC43Q8N309 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRC43Q8N309 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
LRRC43Q8N309 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.55■■□□□ 1.36
LRRC43Q8N309 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.55■■□□□ 1.36
LRRC43Q8N309 RAP2CP1-201ENST00000605103 478 ntBASIC23.55■■□□□ 1.36
LRRC43Q8N309 BID-214ENST00000617586 542 ntTSL 5 BASIC23.55■■□□□ 1.36
LRRC43Q8N309 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.55■■□□□ 1.36
LRRC43Q8N309 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC43Q8N309 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC43Q8N309 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC43Q8N309 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC43Q8N309 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRRC43Q8N309 CDCA4P2-201ENST00000441182 718 ntBASIC23.54■■□□□ 1.36
LRRC43Q8N309 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.54■■□□□ 1.36
LRRC43Q8N309 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.54■■□□□ 1.36
LRRC43Q8N309 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.54■■□□□ 1.36
LRRC43Q8N309 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC43Q8N309 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
LRRC43Q8N309 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC43Q8N309 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.53■■□□□ 1.36
LRRC43Q8N309 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC43Q8N309 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRC43Q8N309 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRC43Q8N309 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC43Q8N309 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRC43Q8N309 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.53■■□□□ 1.36
LRRC43Q8N309 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC43Q8N309 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LRRC43Q8N309 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.52■■□□□ 1.36
LRRC43Q8N309 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRC43Q8N309 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.52■■□□□ 1.36
LRRC43Q8N309 AC079140.4-201ENST00000507448 529 ntBASIC23.52■■□□□ 1.36
LRRC43Q8N309 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms