Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 AC139530.1-201ENST00000575312 1977 ntBASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE9Q8IYJ1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE9Q8IYJ1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CPNE9Q8IYJ1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.58■■□□□ 1.04
CPNE9Q8IYJ1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CPNE9Q8IYJ1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE9Q8IYJ1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 SERBP1P1-201ENST00000396021 1160 ntBASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 AL136116.3-201ENST00000402907 1138 ntBASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE9Q8IYJ1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 SYT6-210ENST00000641643 1587 ntBASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE9Q8IYJ1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 AC137767.1-201ENST00000602918 1920 ntBASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 LINC00565-201ENST00000562710 2331 ntBASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CPNE9Q8IYJ1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE9Q8IYJ1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms