Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDHR3Q6ZTQ4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CDHR3Q6ZTQ4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDHR3Q6ZTQ4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDHR3Q6ZTQ4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 AC010542.4-201ENST00000563151 1910 ntBASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDHR3Q6ZTQ4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.88■■□□□ 1.09
CDHR3Q6ZTQ4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 FAM99A-202ENST00000538190 1989 ntBASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 LINC01529-204ENST00000636474 1715 ntBASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDHR3Q6ZTQ4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDHR3Q6ZTQ4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.86■■□□□ 1.09
CDHR3Q6ZTQ4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDHR3Q6ZTQ4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.86■■□□□ 1.09
CDHR3Q6ZTQ4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDHR3Q6ZTQ4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.86■■□□□ 1.09
CDHR3Q6ZTQ4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms