Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 AL157384.1-201ENST00000445995 2473 ntBASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXR1Q6PIV2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXR1Q6PIV2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXR1Q6PIV2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXR1Q6PIV2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FOXR1Q6PIV2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXR1Q6PIV2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR1Q6PIV2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR1Q6PIV2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXR1Q6PIV2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.64■■□□□ 1.21
FOXR1Q6PIV2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXR1Q6PIV2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
FOXR1Q6PIV2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 AC007952.6-201ENST00000573168 2673 ntBASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 AC003957.1-201ENST00000625108 2673 ntBASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 AC096631.2-201ENST00000436136 790 ntBASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.63■■□□□ 1.21
FOXR1Q6PIV2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 AC092053.2-201ENST00000640557 1818 ntBASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
FOXR1Q6PIV2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 MIR3621-201ENST00000580529 85 ntBASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FOXR1Q6PIV2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 AC110285.6-201ENST00000617652 491 ntBASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 ESRRAP2-201ENST00000418437 1549 ntBASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FOXR1Q6PIV2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 AC011551.1-201ENST00000614101 683 ntBASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
FOXR1Q6PIV2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 AC080038.3-201ENST00000623346 1952 ntBASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FOXR1Q6PIV2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.58■■□□□ 1.2
FOXR1Q6PIV2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.58■■□□□ 1.2
FOXR1Q6PIV2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.58■■□□□ 1.2
FOXR1Q6PIV2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
FOXR1Q6PIV2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms