Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL13A1Q5TAT6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL13A1Q5TAT6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.19■■□□□ 1.62
COL13A1Q5TAT6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL13A1Q5TAT6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL13A1Q5TAT6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
COL13A1Q5TAT6 AC068338.2-201ENST00000563278 1430 ntBASIC25.18■■□□□ 1.62
COL13A1Q5TAT6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
COL13A1Q5TAT6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 KRT17P2-201ENST00000300992 1314 ntBASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 TSPY7P-201ENST00000431358 1114 ntBASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 TSPY15P-201ENST00000457163 923 ntBASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL13A1Q5TAT6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL13A1Q5TAT6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL13A1Q5TAT6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.16■■□□□ 1.62
COL13A1Q5TAT6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.16■■□□□ 1.62
COL13A1Q5TAT6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.16■■□□□ 1.62
COL13A1Q5TAT6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.16■■□□□ 1.62
COL13A1Q5TAT6 AL022069.1-201ENST00000568025 1636 ntBASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 OR10C1-204ENST00000622521 1039 ntBASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 AC055733.4-201ENST00000638462 1354 ntBASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL13A1Q5TAT6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL13A1Q5TAT6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL13A1Q5TAT6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL13A1Q5TAT6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL13A1Q5TAT6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.14■■□□□ 1.62
COL13A1Q5TAT6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL13A1Q5TAT6 AP004609.3-201ENST00000610705 1884 ntBASIC25.14■■□□□ 1.61
COL13A1Q5TAT6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL13A1Q5TAT6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
COL13A1Q5TAT6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.14■■□□□ 1.61
COL13A1Q5TAT6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
COL13A1Q5TAT6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
COL13A1Q5TAT6 AC016405.3-201ENST00000607710 860 ntBASIC25.13■■□□□ 1.61
COL13A1Q5TAT6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL13A1Q5TAT6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL13A1Q5TAT6 AL512625.2-201ENST00000417533 625 ntBASIC25.12■■□□□ 1.61
COL13A1Q5TAT6 AP001160.3-201ENST00000601484 763 ntBASIC25.12■■□□□ 1.61
COL13A1Q5TAT6 KRT87P-202ENST00000534226 1464 ntBASIC25.12■■□□□ 1.61
COL13A1Q5TAT6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL13A1Q5TAT6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL13A1Q5TAT6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL13A1Q5TAT6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 AC008403.3-201ENST00000598924 454 ntBASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL13A1Q5TAT6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 AC013268.1-206ENST00000638368 961 ntBASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 AC112229.1-201ENST00000639295 961 ntBASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.09■■□□□ 1.61
COL13A1Q5TAT6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms