Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRPEP62304 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRPEP62304 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNRPEP62304 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRPEP62304 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRPEP62304 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SNRPEP62304 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRPEP62304 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRPEP62304 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRPEP62304 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRPEP62304 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNRPEP62304 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
SNRPEP62304 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNRPEP62304 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SNRPEP62304 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.85■□□□□ 0.29
SNRPEP62304 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SNRPEP62304 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.85■□□□□ 0.29
SNRPEP62304 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 AC098818.2-201ENST00000564925 2320 ntBASIC16.85■□□□□ 0.29
SNRPEP62304 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNRPEP62304 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SNRPEP62304 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNRPEP62304 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SNRPEP62304 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC16.84■□□□□ 0.29
SNRPEP62304 AC120498.9-201ENST00000339021 3867 ntBASIC16.84■□□□□ 0.29
SNRPEP62304 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNRPEP62304 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.84■□□□□ 0.29
SNRPEP62304 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNRPEP62304 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.84■□□□□ 0.29
SNRPEP62304 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNRPEP62304 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
SNRPEP62304 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNRPEP62304 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNRPEP62304 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRPEP62304 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRPEP62304 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNRPEP62304 PCDHAC2-203ENST00000615316 3011 ntBASIC16.83■□□□□ 0.28
SNRPEP62304 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.83■□□□□ 0.28
SNRPEP62304 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNRPEP62304 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SNRPEP62304 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNRPEP62304 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.82■□□□□ 0.28
SNRPEP62304 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.82■□□□□ 0.28
SNRPEP62304 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.82■□□□□ 0.28
SNRPEP62304 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.82■□□□□ 0.28
SNRPEP62304 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
SNRPEP62304 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SNRPEP62304 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRPEP62304 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
SNRPEP62304 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRPEP62304 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRPEP62304 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SNRPEP62304 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SNRPEP62304 FEM1AP1-201ENST00000431297 1995 ntBASIC16.81■□□□□ 0.28
SNRPEP62304 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRPEP62304 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRPEP62304 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SNRPEP62304 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRPEP62304 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRPEP62304 LTB4R2-202ENST00000528054 3092 ntBASIC16.81■□□□□ 0.28
SNRPEP62304 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPEP62304 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SNRPEP62304 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPEP62304 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNRPEP62304 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SNRPEP62304 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPEP62304 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNRPEP62304 BX323043.1-201ENST00000641006 1765 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms