Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XCR1P46094 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
XCR1P46094 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
XCR1P46094 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
XCR1P46094 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.82■□□□□ 0.92
XCR1P46094 AC105265.2-201ENST00000467189 838 ntBASIC20.82■□□□□ 0.92
XCR1P46094 AC126544.1-201ENST00000580842 1059 ntBASIC20.82■□□□□ 0.92
XCR1P46094 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
XCR1P46094 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
XCR1P46094 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
XCR1P46094 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
XCR1P46094 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
XCR1P46094 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XCR1P46094 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.81■□□□□ 0.92
XCR1P46094 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.81■□□□□ 0.92
XCR1P46094 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
XCR1P46094 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.81■□□□□ 0.92
XCR1P46094 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
XCR1P46094 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
XCR1P46094 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XCR1P46094 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.8■□□□□ 0.92
XCR1P46094 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.8■□□□□ 0.92
XCR1P46094 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XCR1P46094 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XCR1P46094 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
XCR1P46094 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
XCR1P46094 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.8■□□□□ 0.92
XCR1P46094 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
XCR1P46094 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.8■□□□□ 0.92
XCR1P46094 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.8■□□□□ 0.92
XCR1P46094 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.8■□□□□ 0.92
XCR1P46094 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
XCR1P46094 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.8■□□□□ 0.92
XCR1P46094 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
XCR1P46094 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XCR1P46094 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XCR1P46094 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XCR1P46094 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
XCR1P46094 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XCR1P46094 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XCR1P46094 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.79■□□□□ 0.92
XCR1P46094 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XCR1P46094 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
XCR1P46094 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
XCR1P46094 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XCR1P46094 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XCR1P46094 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
XCR1P46094 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
XCR1P46094 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 AC127496.7-201ENST00000625110 1798 ntBASIC20.78■□□□□ 0.92
XCR1P46094 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.78■□□□□ 0.92
XCR1P46094 ZNRF2P3-201ENST00000424200 374 ntBASIC20.78■□□□□ 0.92
XCR1P46094 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
XCR1P46094 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
XCR1P46094 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
XCR1P46094 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XCR1P46094 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
XCR1P46094 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
XCR1P46094 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
XCR1P46094 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.77■□□□□ 0.92
XCR1P46094 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
XCR1P46094 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
XCR1P46094 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.77■□□□□ 0.92
XCR1P46094 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.77■□□□□ 0.92
XCR1P46094 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.77■□□□□ 0.92
XCR1P46094 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
XCR1P46094 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
XCR1P46094 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.77■□□□□ 0.92
XCR1P46094 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
XCR1P46094 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
XCR1P46094 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.76■□□□□ 0.91
XCR1P46094 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.76■□□□□ 0.91
XCR1P46094 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
XCR1P46094 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
XCR1P46094 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.76■□□□□ 0.91
XCR1P46094 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.76■□□□□ 0.91
XCR1P46094 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
XCR1P46094 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
XCR1P46094 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
XCR1P46094 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
XCR1P46094 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
XCR1P46094 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
XCR1P46094 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.75■□□□□ 0.91
XCR1P46094 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
XCR1P46094 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
XCR1P46094 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms