Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1BP28222 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.71■■□□□ 1.07
HTR1BP28222 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1BP28222 AL162430.1-201ENST00000480705 870 ntBASIC21.71■■□□□ 1.07
HTR1BP28222 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
HTR1BP28222 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.71■■□□□ 1.07
HTR1BP28222 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1BP28222 MIR6084-201ENST00000622012 110 ntBASIC21.71■■□□□ 1.07
HTR1BP28222 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1BP28222 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1BP28222 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.71■■□□□ 1.07
HTR1BP28222 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1BP28222 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.71■■□□□ 1.07
HTR1BP28222 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
HTR1BP28222 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1BP28222 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.71■■□□□ 1.07
HTR1BP28222 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.7■■□□□ 1.06
HTR1BP28222 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
HTR1BP28222 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HTR1BP28222 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1BP28222 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1BP28222 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1BP28222 ANOS2P-203ENST00000472227 1816 ntBASIC21.69■■□□□ 1.06
HTR1BP28222 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1BP28222 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1BP28222 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.69■■□□□ 1.06
HTR1BP28222 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.69■■□□□ 1.06
HTR1BP28222 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1BP28222 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.69■■□□□ 1.06
HTR1BP28222 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1BP28222 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1BP28222 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.69■■□□□ 1.06
HTR1BP28222 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.68■■□□□ 1.06
HTR1BP28222 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.68■■□□□ 1.06
HTR1BP28222 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HTR1BP28222 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1BP28222 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.68■■□□□ 1.06
HTR1BP28222 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.68■■□□□ 1.06
HTR1BP28222 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.68■■□□□ 1.06
HTR1BP28222 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.68■■□□□ 1.06
HTR1BP28222 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HTR1BP28222 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.68■■□□□ 1.06
HTR1BP28222 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1BP28222 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.67■■□□□ 1.06
HTR1BP28222 DUSP8P5-201ENST00000422884 1815 ntBASIC21.67■■□□□ 1.06
HTR1BP28222 AC092068.2-201ENST00000590491 1708 ntBASIC21.67■■□□□ 1.06
HTR1BP28222 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1BP28222 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1BP28222 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.67■■□□□ 1.06
HTR1BP28222 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.67■■□□□ 1.06
HTR1BP28222 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.67■■□□□ 1.06
HTR1BP28222 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.67■■□□□ 1.06
HTR1BP28222 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1BP28222 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1BP28222 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1BP28222 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1BP28222 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.67■■□□□ 1.06
HTR1BP28222 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1BP28222 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
HTR1BP28222 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.66■■□□□ 1.06
HTR1BP28222 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1BP28222 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.66■■□□□ 1.06
HTR1BP28222 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.66■■□□□ 1.06
HTR1BP28222 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1BP28222 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1BP28222 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HTR1BP28222 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.66■■□□□ 1.06
HTR1BP28222 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.66■■□□□ 1.06
HTR1BP28222 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.66■■□□□ 1.06
HTR1BP28222 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.66■■□□□ 1.06
HTR1BP28222 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1BP28222 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
HTR1BP28222 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HTR1BP28222 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
HTR1BP28222 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1BP28222 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1BP28222 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1BP28222 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1BP28222 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.65■■□□□ 1.06
HTR1BP28222 LINC02228-203ENST00000641970 1355 ntBASIC21.65■■□□□ 1.06
HTR1BP28222 AC010141.3-201ENST00000456659 717 ntBASIC21.65■■□□□ 1.06
HTR1BP28222 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.65■■□□□ 1.06
HTR1BP28222 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1BP28222 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1BP28222 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1BP28222 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HTR1BP28222 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.64■■□□□ 1.06
HTR1BP28222 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.64■■□□□ 1.06
HTR1BP28222 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTR1BP28222 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTR1BP28222 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HTR1BP28222 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HTR1BP28222 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms