Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 VAC8YEL013W 1737 nt2.8□□□□□ -1.96
CDC39P25655 CAF130YGR134W 3369 nt2.8□□□□□ -1.96
CDC39P25655 YEL025CYEL025C 3567 nt2.8□□□□□ -1.96
CDC39P25655 VTA1YLR181C 993 nt2.8□□□□□ -1.96
CDC39P25655 YNL228WYNL228W 777 nt2.8□□□□□ -1.96
CDC39P25655 SIP1YDR422C 2448 nt2.8□□□□□ -1.96
CDC39P25655 SSM4YIL030C 3960 nt2.79□□□□□ -1.96
CDC39P25655 ARO1YDR127W 4767 nt2.79□□□□□ -1.96
CDC39P25655 KRE5YOR336W 4098 nt2.79□□□□□ -1.96
CDC39P25655 YIL014C-AYIL014C-A 315 nt2.79□□□□□ -1.96
CDC39P25655 RHO5YNL180C 996 nt2.79□□□□□ -1.96
CDC39P25655 TIR2YOR010C 756 nt2.79□□□□□ -1.96
CDC39P25655 YOR034C-AYOR034C-A 243 nt2.79□□□□□ -1.96
CDC39P25655 NIP7YPL211W 546 nt2.79□□□□□ -1.96
CDC39P25655 BDP1YNL039W 1785 nt2.79□□□□□ -1.96
CDC39P25655 DHR2YKL078W 2208 nt2.79□□□□□ -1.96
CDC39P25655 TAF12YDR145W 1620 nt2.79□□□□□ -1.96
CDC39P25655 TFA1YKL028W 1449 nt2.79□□□□□ -1.96
CDC39P25655 RAD26YJR035W 3258 nt2.78□□□□□ -1.96
CDC39P25655 AKR1YDR264C 2295 nt2.78□□□□□ -1.96
CDC39P25655 ARP10YDR106W 855 nt2.78□□□□□ -1.96
CDC39P25655 YDR526CYDR526C 471 nt2.78□□□□□ -1.96
CDC39P25655 MRP13YGR084C 1020 nt2.78□□□□□ -1.96
CDC39P25655 YPR108W-AYPR108W-A 213 nt2.78□□□□□ -1.96
CDC39P25655 RTT109YLL002W 1311 nt2.78□□□□□ -1.96
CDC39P25655 YTA7YGR270W 4140 nt2.78□□□□□ -1.96
CDC39P25655 YGL218WYGL218W 651 nt2.78□□□□□ -1.96
CDC39P25655 ARC15YIL062C 465 nt2.78□□□□□ -1.96
CDC39P25655 PAM18YLR008C 507 nt2.78□□□□□ -1.96
CDC39P25655 RIM9YMR063W 720 nt2.78□□□□□ -1.96
CDC39P25655 GIS2YNL255C 462 nt2.78□□□□□ -1.96
CDC39P25655 PZF1YPR186C 1290 nt2.78□□□□□ -1.96
CDC39P25655 XRS2YDR369C 2565 nt2.78□□□□□ -1.96
CDC39P25655 YDL176WYDL176W 2127 nt2.78□□□□□ -1.97
CDC39P25655 YGL082WYGL082W 1146 nt2.77□□□□□ -1.97
CDC39P25655 YHR145CYHR145C 357 nt2.77□□□□□ -1.97
CDC39P25655 YJR128WYJR128W 360 nt2.77□□□□□ -1.97
CDC39P25655 CIT1YNR001C 1440 nt2.77□□□□□ -1.97
CDC39P25655 AUS1YOR011W 4185 nt2.77□□□□□ -1.97
CDC39P25655 POL12YBL035C 2118 nt2.77□□□□□ -1.97
CDC39P25655 YPS6YIR039C 1614 nt2.77□□□□□ -1.97
CDC39P25655 SLX8YER116C 825 nt2.77□□□□□ -1.97
CDC39P25655 YGR079WYGR079W 1113 nt2.77□□□□□ -1.97
CDC39P25655 PPX1YHR201C 1194 nt2.77□□□□□ -1.97
CDC39P25655 MTD1YKR080W 963 nt2.77□□□□□ -1.97
CDC39P25655 APC9YLR102C 798 nt2.77□□□□□ -1.97
CDC39P25655 RRG9YNL213C 645 nt2.77□□□□□ -1.97
CDC39P25655 REC8YPR007C 2043 nt2.77□□□□□ -1.97
CDC39P25655 NOP4YPL043W 2058 nt2.77□□□□□ -1.97
CDC39P25655 YMR317WYMR317W 3423 nt2.76□□□□□ -1.97
CDC39P25655 PUT2YHR037W 1728 nt2.76□□□□□ -1.97
CDC39P25655 BCH2YKR027W 2298 nt2.76□□□□□ -1.97
CDC39P25655 RTS1YOR014W 2274 nt2.76□□□□□ -1.97
CDC39P25655 YBL039W-BYBL039W-B 180 nt2.76□□□□□ -1.97
CDC39P25655 TPM1YNL079C 600 nt2.76□□□□□ -1.97
CDC39P25655 CMD1YBR109C 444 nt2.76□□□□□ -1.97
CDC39P25655 KTR7YIL085C 1554 nt2.76□□□□□ -1.97
CDC39P25655 PTM1YKL039W 1572 nt2.76□□□□□ -1.97
CDC39P25655 YPR022CYPR022C 3402 nt2.76□□□□□ -1.97
CDC39P25655 BMH2YDR099W 822 nt2.75□□□□□ -1.97
CDC39P25655 HAT2YEL056W 1206 nt2.75□□□□□ -1.97
CDC39P25655 VPS45YGL095C 1734 nt2.75□□□□□ -1.97
CDC39P25655 FKH1YIL131C 1455 nt2.75□□□□□ -1.97
CDC39P25655 MTR4YJL050W 3222 nt2.75□□□□□ -1.97
CDC39P25655 FUN12YAL035W 3009 nt2.75□□□□□ -1.97
CDC39P25655 IXR1YKL032C 1794 nt2.75□□□□□ -1.97
CDC39P25655 EXO5YBR163W 1758 nt2.75□□□□□ -1.97
CDC39P25655 UPS3YDR185C 540 nt2.75□□□□□ -1.97
CDC39P25655 FMP48YGR052W 1110 nt2.75□□□□□ -1.97
CDC39P25655 WSS1YHR134W 810 nt2.75□□□□□ -1.97
CDC39P25655 RUF5-1RUF5-1 710 nt2.75□□□□□ -1.97
CDC39P25655 RUF5-2RUF5-2 710 nt2.75□□□□□ -1.97
CDC39P25655 SAT4YCR008W 1812 nt2.75□□□□□ -1.97
CDC39P25655 UBP10YNL186W 2379 nt2.74□□□□□ -1.97
CDC39P25655 APC11YDL008W 498 nt2.74□□□□□ -1.97
CDC39P25655 DCV1YFR012W 609 nt2.74□□□□□ -1.97
CDC39P25655 YDR444WYDR444W 2064 nt2.74□□□□□ -1.97
CDC39P25655 TGL3YMR313C 1929 nt2.74□□□□□ -1.97
CDC39P25655 SPA2YLL021W 4401 nt2.74□□□□□ -1.97
CDC39P25655 YDR464C-AYDR464C-A 189 nt2.74□□□□□ -1.97
CDC39P25655 PRX1YBL064C 786 nt2.74□□□□□ -1.97
CDC39P25655 CPA2YJR109C 3357 nt2.73□□□□□ -1.97
CDC39P25655 SKP2YNL311C 2292 nt2.73□□□□□ -1.97
CDC39P25655 UBC1YDR177W 648 nt2.73□□□□□ -1.97
CDC39P25655 USB1YLR132C 873 nt2.73□□□□□ -1.97
CDC39P25655 LDS2YOL047C 1071 nt2.73□□□□□ -1.97
CDC39P25655 DSF2YBR007C 2211 nt2.73□□□□□ -1.97
CDC39P25655 SWP82YFL049W 1872 nt2.73□□□□□ -1.97
CDC39P25655 GSC2YGR032W 5688 nt2.73□□□□□ -1.97
CDC39P25655 CLB4YLR210W 1383 nt2.73□□□□□ -1.97
CDC39P25655 TLC1TLC1 1301 nt2.73□□□□□ -1.97
CDC39P25655 YJL211CYJL211C 444 nt2.72□□□□□ -1.97
CDC39P25655 RPL17AYKL180W 555 nt2.72□□□□□ -1.97
CDC39P25655 YMR087WYMR087W 855 nt2.72□□□□□ -1.97
CDC39P25655 TFB2YPL122C 1542 nt2.72□□□□□ -1.97
CDC39P25655 LAP2YNL045W 2016 nt2.72□□□□□ -1.97
CDC39P25655 RGP1YDR137W 1992 nt2.72□□□□□ -1.97
CDC39P25655 PTR3YFR029W 2037 nt2.72□□□□□ -1.97
CDC39P25655 RSC3YDR303C 2658 nt2.72□□□□□ -1.97
CDC39P25655 CLD1YGR110W 1338 nt2.72□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms