Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.91■□□□□ 0.62
CCNKO75909 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCNKO75909 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNKO75909 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCNKO75909 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.9■□□□□ 0.62
CCNKO75909 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCNKO75909 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCNKO75909 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCNKO75909 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
CCNKO75909 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCNKO75909 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
CCNKO75909 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
CCNKO75909 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.89■□□□□ 0.62
CCNKO75909 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CCNKO75909 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNKO75909 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.89■□□□□ 0.61
CCNKO75909 AC008813.1-201ENST00000536597 885 ntBASIC18.89■□□□□ 0.61
CCNKO75909 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNKO75909 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNKO75909 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNKO75909 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCNKO75909 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.88■□□□□ 0.61
CCNKO75909 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCNKO75909 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 HLA-V-202ENST00000446817 847 ntBASIC18.88■□□□□ 0.61
CCNKO75909 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.88■□□□□ 0.61
CCNKO75909 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.88■□□□□ 0.61
CCNKO75909 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 AL161729.1-201ENST00000604104 1402 ntBASIC18.88■□□□□ 0.61
CCNKO75909 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNKO75909 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNKO75909 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNKO75909 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNKO75909 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCNKO75909 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCNKO75909 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNKO75909 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNKO75909 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CCNKO75909 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L13-201ENST00000554103 1267 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L15-201ENST00000611059 1267 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L23-201ENST00000615195 1269 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L24-201ENST00000617576 1269 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L22-201ENST00000618238 1269 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L20-201ENST00000619712 1269 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L21-201ENST00000622058 1269 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L10-201ENST00000622460 1267 ntBASIC18.86■□□□□ 0.61
CCNKO75909 DUX4L25-201ENST00000624915 1269 ntBASIC18.86■□□□□ 0.61
CCNKO75909 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCNKO75909 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNKO75909 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNKO75909 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNKO75909 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.85■□□□□ 0.61
CCNKO75909 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNKO75909 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNKO75909 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms