Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MIR3181-201ENST00000578512 73 ntBASIC20.31■□□□□ 0.84
HCN1O60741 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HCN1O60741 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
HCN1O60741 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCN1O60741 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCN1O60741 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCN1O60741 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCN1O60741 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
HCN1O60741 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCN1O60741 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HCN1O60741 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HCN1O60741 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCN1O60741 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCN1O60741 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.29■□□□□ 0.84
HCN1O60741 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCN1O60741 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCN1O60741 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCN1O60741 ZNRF2P3-201ENST00000424200 374 ntBASIC20.29■□□□□ 0.84
HCN1O60741 RASA4CP-201ENST00000424092 1398 ntBASIC20.29■□□□□ 0.84
HCN1O60741 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCN1O60741 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCN1O60741 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
HCN1O60741 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.28■□□□□ 0.84
HCN1O60741 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.28■□□□□ 0.84
HCN1O60741 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCN1O60741 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCN1O60741 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCN1O60741 GUSBP5-202ENST00000510805 1989 ntBASIC20.28■□□□□ 0.84
HCN1O60741 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
HCN1O60741 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCN1O60741 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 AC137767.1-201ENST00000602918 1920 ntBASIC20.27■□□□□ 0.84
HCN1O60741 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HCN1O60741 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.27■□□□□ 0.84
HCN1O60741 AC105265.2-201ENST00000467189 838 ntBASIC20.27■□□□□ 0.84
HCN1O60741 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.27■□□□□ 0.84
HCN1O60741 pRNA.6-201ENST00000610482 90 ntBASIC20.27■□□□□ 0.84
HCN1O60741 pRNA.5-201ENST00000612139 90 ntBASIC20.27■□□□□ 0.84
HCN1O60741 pRNA.11-201ENST00000618423 90 ntBASIC20.27■□□□□ 0.84
HCN1O60741 pRNA.13-201ENST00000619112 90 ntBASIC20.27■□□□□ 0.84
HCN1O60741 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.27■□□□□ 0.84
HCN1O60741 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCN1O60741 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
HCN1O60741 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HCN1O60741 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
HCN1O60741 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.26■□□□□ 0.83
HCN1O60741 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.26■□□□□ 0.83
HCN1O60741 CA15P2-201ENST00000611168 834 ntBASIC20.26■□□□□ 0.83
HCN1O60741 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HCN1O60741 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 ESRRAP2-201ENST00000418437 1549 ntBASIC20.26■□□□□ 0.83
HCN1O60741 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 AC127496.7-201ENST00000625110 1798 ntBASIC20.26■□□□□ 0.83
HCN1O60741 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCN1O60741 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
HCN1O60741 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HCN1O60741 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HCN1O60741 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 FP325331.1-202ENST00000623531 1380 ntBASIC20.25■□□□□ 0.83
HCN1O60741 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.25■□□□□ 0.83
HCN1O60741 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCN1O60741 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HCN1O60741 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.25■□□□□ 0.83
HCN1O60741 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.24■□□□□ 0.83
HCN1O60741 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms