Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 MIR219A2-201ENST00000608502 1504 ntBASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV22A0A0B4J277 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV22A0A0B4J277 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRAV22A0A0B4J277 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAV22A0A0B4J277 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms