Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 AC129492.7-201ENST00000622992 756 ntBASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 FAM99A-202ENST00000538190 1989 ntBASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COMMD3-BMI1R4GMX3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
COMMD3-BMI1R4GMX3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
COMMD3-BMI1R4GMX3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3-BMI1R4GMX3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COMMD3-BMI1R4GMX3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COMMD3-BMI1R4GMX3 KRT18P60-201ENST00000312876 1297 ntBASIC20.44■□□□□ 0.86
COMMD3-BMI1R4GMX3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.44■□□□□ 0.86
COMMD3-BMI1R4GMX3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD3-BMI1R4GMX3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COMMD3-BMI1R4GMX3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 LONRF2P2-201ENST00000439212 571 ntBASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 AC080038.3-201ENST00000623346 1952 ntBASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD3-BMI1R4GMX3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD3-BMI1R4GMX3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD3-BMI1R4GMX3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.4■□□□□ 0.86
COMMD3-BMI1R4GMX3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms