Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS1Q9Y6A9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SPCS1Q9Y6A9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS1Q9Y6A9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SPCS1Q9Y6A9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS1Q9Y6A9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SPCS1Q9Y6A9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS1Q9Y6A9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS1Q9Y6A9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SPCS1Q9Y6A9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 LINC01006-201ENST00000333319 2292 ntBASIC15.08■□□□□ 0
SPCS1Q9Y6A9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SPCS1Q9Y6A9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 AC135983.2-203ENST00000454486 1613 ntBASIC15.07■□□□□ 0
SPCS1Q9Y6A9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPCS1Q9Y6A9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 AC080038.3-201ENST00000623346 1952 ntBASIC15.06■□□□□ 0
SPCS1Q9Y6A9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SPCS1Q9Y6A9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPCS1Q9Y6A9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SPCS1Q9Y6A9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPCS1Q9Y6A9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPCS1Q9Y6A9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.05■□□□□ 0
SPCS1Q9Y6A9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SPCS1Q9Y6A9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS1Q9Y6A9 AC120498.9-201ENST00000339021 3867 ntBASIC15.05■□□□□ -0
SPCS1Q9Y6A9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms