Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA7Q9Y5G6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA7Q9Y5G6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHGA7Q9Y5G6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA7Q9Y5G6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA7Q9Y5G6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHGA7Q9Y5G6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA7Q9Y5G6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA7Q9Y5G6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 AL022069.1-201ENST00000568025 1636 ntBASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 AC233992.3-201ENST00000607491 485 ntBASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGA7Q9Y5G6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 BX842568.3-201ENST00000418104 571 ntBASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA7Q9Y5G6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA7Q9Y5G6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA7Q9Y5G6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
PCDHGA7Q9Y5G6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PCDHGA7Q9Y5G6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA7Q9Y5G6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGA7Q9Y5G6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA7Q9Y5G6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA7Q9Y5G6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHGA7Q9Y5G6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA7Q9Y5G6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 AC007375.3-201ENST00000600936 2314 ntBASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGA7Q9Y5G6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA7Q9Y5G6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA7Q9Y5G6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA7Q9Y5G6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms