Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
CDC42SE1Q9NRR8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE1Q9NRR8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CDC42SE1Q9NRR8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE1Q9NRR8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
CDC42SE1Q9NRR8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms