Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSX1Q9H4S2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GSX1Q9H4S2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
GSX1Q9H4S2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
GSX1Q9H4S2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
GSX1Q9H4S2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GSX1Q9H4S2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 AC083906.2-201ENST00000511578 360 ntBASIC18.48■□□□□ 0.55
GSX1Q9H4S2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 AL022069.1-201ENST00000568025 1636 ntBASIC18.48■□□□□ 0.55
GSX1Q9H4S2 AC133637.1-201ENST00000624115 1537 ntBASIC18.48■□□□□ 0.55
GSX1Q9H4S2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GSX1Q9H4S2 LINC01124-201ENST00000409786 2117 ntBASIC18.47■□□□□ 0.55
GSX1Q9H4S2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GSX1Q9H4S2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GSX1Q9H4S2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GSX1Q9H4S2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GSX1Q9H4S2 AL138781.1-201ENST00000566567 1274 ntBASIC18.47■□□□□ 0.55
GSX1Q9H4S2 AL121832.2-201ENST00000610979 668 ntBASIC18.47■□□□□ 0.55
GSX1Q9H4S2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.47■□□□□ 0.55
GSX1Q9H4S2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GSX1Q9H4S2 AC141586.4-201ENST00000624558 1573 ntBASIC18.47■□□□□ 0.55
GSX1Q9H4S2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 TSPY6P-201ENST00000448518 926 ntBASIC18.46■□□□□ 0.55
GSX1Q9H4S2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 DUX4L4-201ENST00000566884 1269 ntBASIC18.46■□□□□ 0.55
GSX1Q9H4S2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.46■□□□□ 0.55
GSX1Q9H4S2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 AL050303.2-201ENST00000619798 666 ntBASIC18.45■□□□□ 0.54
GSX1Q9H4S2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GSX1Q9H4S2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms