Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 AF213884.3-201ENST00000563833 479 ntBASIC20.27■□□□□ 0.84
UBQLN3Q9H347 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBQLN3Q9H347 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBQLN3Q9H347 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
UBQLN3Q9H347 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 ESRRAP2-201ENST00000418437 1549 ntBASIC20.24■□□□□ 0.83
UBQLN3Q9H347 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 AC091305.1-201ENST00000479476 895 ntBASIC20.24■□□□□ 0.83
UBQLN3Q9H347 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBQLN3Q9H347 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBQLN3Q9H347 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 AC127496.7-201ENST00000625110 1798 ntBASIC20.22■□□□□ 0.83
UBQLN3Q9H347 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 AC027682.1-201ENST00000562846 899 ntBASIC20.22■□□□□ 0.83
UBQLN3Q9H347 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.22■□□□□ 0.83
UBQLN3Q9H347 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 AC133637.1-201ENST00000624115 1537 ntBASIC20.22■□□□□ 0.83
UBQLN3Q9H347 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
UBQLN3Q9H347 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 RASA4CP-201ENST00000424092 1398 ntBASIC20.21■□□□□ 0.83
UBQLN3Q9H347 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 BX842568.3-201ENST00000418104 571 ntBASIC20.21■□□□□ 0.83
UBQLN3Q9H347 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 AL353803.4-201ENST00000565882 1934 ntBASIC20.21■□□□□ 0.83
UBQLN3Q9H347 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.21■□□□□ 0.83
UBQLN3Q9H347 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms