Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
S1PR3Q99500 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.01■□□□□ 0.47
S1PR3Q99500 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.01■□□□□ 0.47
S1PR3Q99500 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
S1PR3Q99500 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.01■□□□□ 0.47
S1PR3Q99500 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
S1PR3Q99500 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
S1PR3Q99500 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.01■□□□□ 0.47
S1PR3Q99500 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
S1PR3Q99500 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
S1PR3Q99500 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.01■□□□□ 0.47
S1PR3Q99500 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
S1PR3Q99500 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
S1PR3Q99500 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18■□□□□ 0.47
S1PR3Q99500 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18■□□□□ 0.47
S1PR3Q99500 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18■□□□□ 0.47
S1PR3Q99500 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18■□□□□ 0.47
S1PR3Q99500 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18■□□□□ 0.47
S1PR3Q99500 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18■□□□□ 0.47
S1PR3Q99500 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
S1PR3Q99500 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
S1PR3Q99500 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
S1PR3Q99500 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
S1PR3Q99500 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
S1PR3Q99500 LINC00565-201ENST00000562710 2331 ntBASIC17.99■□□□□ 0.47
S1PR3Q99500 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
S1PR3Q99500 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
S1PR3Q99500 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.99■□□□□ 0.47
S1PR3Q99500 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.99■□□□□ 0.47
S1PR3Q99500 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
S1PR3Q99500 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.99■□□□□ 0.47
S1PR3Q99500 AC131212.1-201ENST00000613771 668 ntBASIC17.99■□□□□ 0.47
S1PR3Q99500 AC241377.3-202ENST00000626088 1088 ntBASIC17.99■□□□□ 0.47
S1PR3Q99500 AC241585.3-202ENST00000628937 1088 ntBASIC17.99■□□□□ 0.47
S1PR3Q99500 AC245100.8-202ENST00000629247 1058 ntBASIC17.99■□□□□ 0.47
S1PR3Q99500 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
S1PR3Q99500 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
S1PR3Q99500 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
S1PR3Q99500 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.98■□□□□ 0.47
S1PR3Q99500 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.98■□□□□ 0.47
S1PR3Q99500 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.98■□□□□ 0.47
S1PR3Q99500 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
S1PR3Q99500 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.97■□□□□ 0.47
S1PR3Q99500 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
S1PR3Q99500 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.97■□□□□ 0.47
S1PR3Q99500 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.97■□□□□ 0.47
S1PR3Q99500 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
S1PR3Q99500 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.97■□□□□ 0.47
S1PR3Q99500 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
S1PR3Q99500 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
S1PR3Q99500 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.97■□□□□ 0.47
S1PR3Q99500 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
S1PR3Q99500 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.96■□□□□ 0.47
S1PR3Q99500 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.96■□□□□ 0.47
S1PR3Q99500 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.96■□□□□ 0.47
S1PR3Q99500 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
S1PR3Q99500 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
S1PR3Q99500 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms