Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FBXW4P1-201ENST00000426721 2239 ntBASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01561Q8N1V8 AC007375.3-201ENST00000600936 2314 ntBASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01561Q8N1V8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 YBX1P4-201ENST00000392794 808 ntBASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC01561Q8N1V8 AC244015.2-201ENST00000616358 1861 ntBASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 AC010542.4-201ENST00000563151 1910 ntBASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01561Q8N1V8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC14.65□□□□□ -0.07
LINC01561Q8N1V8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC01561Q8N1V8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 AC021242.3-201ENST00000607598 1377 ntBASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 AC103724.3-201ENST00000564481 992 ntBASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms