Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CROCCP3Q8IVE0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 AC010542.4-201ENST00000563151 1910 ntBASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CROCCP3Q8IVE0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 AC079630.1-202ENST00000618127 1840 ntBASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CROCCP3Q8IVE0 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CROCCP3Q8IVE0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CROCCP3Q8IVE0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CROCCP3Q8IVE0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CROCCP3Q8IVE0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CROCCP3Q8IVE0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CROCCP3Q8IVE0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms