Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRTM4Q86VH4 MIR935-201ENST00000401179 91 ntBASIC21.52■■□□□ 1.04
LRRTM4Q86VH4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRTM4Q86VH4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
LRRTM4Q86VH4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRRTM4Q86VH4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRTM4Q86VH4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRTM4Q86VH4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRTM4Q86VH4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRTM4Q86VH4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 AL358852.1-201ENST00000623174 1268 ntBASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.47■■□□□ 1.03
LRRTM4Q86VH4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 AC012414.1-201ENST00000556676 535 ntBASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 AL354811.1-201ENST00000610286 706 ntBASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 AC105233.4-201ENST00000642045 216 ntBASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRTM4Q86VH4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRTM4Q86VH4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRTM4Q86VH4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.44■■□□□ 1.02
LRRTM4Q86VH4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.44■■□□□ 1.02
LRRTM4Q86VH4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms