Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 AC239859.2-201ENST00000444165 318 ntBASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 AC010997.5-201ENST00000609182 354 ntBASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.02□□□□□ -0.17
MRPL55Q7Z7F7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 TSPY9P-201ENST00000440215 945 ntBASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 TSPY11P-201ENST00000442607 1045 ntBASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL55Q7Z7F7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 AC009299.2-201ENST00000482477 511 ntBASIC14□□□□□ -0.17
MRPL55Q7Z7F7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 DUX4L4-201ENST00000566884 1269 ntBASIC14□□□□□ -0.17
MRPL55Q7Z7F7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MRPL55Q7Z7F7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MRPL55Q7Z7F7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 AC009102.2-201ENST00000606772 1639 ntBASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL55Q7Z7F7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms