Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 LINC00526-201ENST00000581067 1875 ntBASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 AC008406.3-201ENST00000620001 1374 ntBASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COLCA1Q6ZS62 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COLCA1Q6ZS62 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 UNC93B3-201ENST00000308076 687 ntBASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COLCA1Q6ZS62 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 EP400NL-214ENST00000641289 2402 ntBASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 AC010525.1-201ENST00000585559 441 ntBASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COLCA1Q6ZS62 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COLCA1Q6ZS62 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms