Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 LINC01960-201ENST00000563759 1884 ntBASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 SLC47A1P1-202ENST00000449666 945 ntBASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 AC091305.1-201ENST00000479476 895 ntBASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 AP005435.1-201ENST00000529293 1178 ntBASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 AC142381.2-201ENST00000566120 298 ntBASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC144NLQ6NUI1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 AC126544.1-201ENST00000580842 1059 ntBASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC144NLQ6NUI1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC144NLQ6NUI1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC144NLQ6NUI1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 RASA4CP-201ENST00000424092 1398 ntBASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 MIR638-201ENST00000385237 100 ntBASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 AP001330.3-201ENST00000520123 633 ntBASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 AC008764.7-201ENST00000593779 1081 ntBASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144NLQ6NUI1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 ESRRAP2-201ENST00000418437 1549 ntBASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 AF213884.3-201ENST00000563833 479 ntBASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 AC005837.3-201ENST00000612163 286 ntBASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 AL031602.1-201ENST00000633169 911 ntBASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144NLQ6NUI1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 MIR939-201ENST00000401314 82 ntBASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 AC099791.1-201ENST00000416440 715 ntBASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144NLQ6NUI1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 AC010525.1-201ENST00000585559 441 ntBASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC144NLQ6NUI1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms