Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.27□□□□□ -0.44
UBR4Q5T4S7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.27□□□□□ -0.44
UBR4Q5T4S7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBR4Q5T4S7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
UBR4Q5T4S7 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.27□□□□□ -0.44
UBR4Q5T4S7 RPPH1-201ENST00000516869 333 ntBASIC12.27□□□□□ -0.44
UBR4Q5T4S7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UBR4Q5T4S7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 KRT18P56-201ENST00000507275 550 ntBASIC12.26□□□□□ -0.45
UBR4Q5T4S7 AL049597.2-201ENST00000565575 961 ntBASIC12.26□□□□□ -0.45
UBR4Q5T4S7 AC133637.1-201ENST00000624115 1537 ntBASIC12.26□□□□□ -0.45
UBR4Q5T4S7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 AC087499.1-201ENST00000418141 1075 ntBASIC12.26□□□□□ -0.45
UBR4Q5T4S7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 LINC01003-201ENST00000564834 1764 ntBASIC12.26□□□□□ -0.45
UBR4Q5T4S7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
UBR4Q5T4S7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 AC023511.2-201ENST00000618803 211 ntBASIC12.25□□□□□ -0.45
UBR4Q5T4S7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 AC079140.4-201ENST00000507448 529 ntBASIC12.25□□□□□ -0.45
UBR4Q5T4S7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UBR4Q5T4S7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 AP003097.1-201ENST00000530657 1135 ntBASIC12.24□□□□□ -0.45
UBR4Q5T4S7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.24□□□□□ -0.45
UBR4Q5T4S7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 OR2I1P-207ENST00000453522 948 ntBASIC12.23□□□□□ -0.45
UBR4Q5T4S7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.23□□□□□ -0.45
UBR4Q5T4S7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms