Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H3AP68431 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HIST1H3AP68431 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H3AP68431 AC137767.1-201ENST00000602918 1920 ntBASIC19.16■□□□□ 0.66
HIST1H3AP68431 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H3AP68431 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H3AP68431 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H3AP68431 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HIST1H3AP68431 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST1H3AP68431 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H3AP68431 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H3AP68431 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST1H3AP68431 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H3AP68431 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HIST1H3AP68431 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H3AP68431 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H3AP68431 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H3AP68431 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H3AP68431 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H3AP68431 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
HIST1H3AP68431 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.15■□□□□ 0.66
HIST1H3AP68431 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H3AP68431 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HIST1H3AP68431 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H3AP68431 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H3AP68431 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H3AP68431 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HIST1H3AP68431 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
HIST1H3AP68431 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H3AP68431 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H3AP68431 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H3AP68431 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H3AP68431 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 AL138724.1-201ENST00000606771 1088 ntBASIC19.14■□□□□ 0.65
HIST1H3AP68431 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.14■□□□□ 0.65
HIST1H3AP68431 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H3AP68431 AC092053.2-201ENST00000640557 1818 ntBASIC19.14■□□□□ 0.65
HIST1H3AP68431 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
HIST1H3AP68431 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HIST1H3AP68431 OR2I1P-207ENST00000453522 948 ntBASIC19.13■□□□□ 0.65
HIST1H3AP68431 DUX4L19-201ENST00000557448 1267 ntBASIC19.13■□□□□ 0.65
HIST1H3AP68431 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.13■□□□□ 0.65
HIST1H3AP68431 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HIST1H3AP68431 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H3AP68431 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H3AP68431 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H3AP68431 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H3AP68431 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H3AP68431 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HIST1H3AP68431 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H3AP68431 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H3AP68431 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H3AP68431 SERBP1P1-201ENST00000396021 1160 ntBASIC19.11■□□□□ 0.65
HIST1H3AP68431 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.11■□□□□ 0.65
HIST1H3AP68431 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H3AP68431 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H3AP68431 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H3AP68431 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H3AP68431 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.11■□□□□ 0.65
HIST1H3AP68431 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H3AP68431 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.1■□□□□ 0.65
HIST1H3AP68431 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms