Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.87■■□□□ 1.89
PDE1AP54750 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
PDE1AP54750 CA15P2-201ENST00000611168 834 ntBASIC26.87■■□□□ 1.89
PDE1AP54750 AL031602.1-201ENST00000633169 911 ntBASIC26.87■■□□□ 1.89
PDE1AP54750 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.87■■□□□ 1.89
PDE1AP54750 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.87■■□□□ 1.89
PDE1AP54750 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PDE1AP54750 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDE1AP54750 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDE1AP54750 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDE1AP54750 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDE1AP54750 DUX4L19-201ENST00000557448 1267 ntBASIC26.86■■□□□ 1.89
PDE1AP54750 AL138724.1-201ENST00000606771 1088 ntBASIC26.86■■□□□ 1.89
PDE1AP54750 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDE1AP54750 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDE1AP54750 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
PDE1AP54750 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PDE1AP54750 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.85■■□□□ 1.89
PDE1AP54750 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.85■■□□□ 1.89
PDE1AP54750 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDE1AP54750 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDE1AP54750 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PDE1AP54750 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.85■■□□□ 1.89
PDE1AP54750 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDE1AP54750 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDE1AP54750 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.85■■□□□ 1.89
PDE1AP54750 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
PDE1AP54750 OR2I1P-207ENST00000453522 948 ntBASIC26.84■■□□□ 1.89
PDE1AP54750 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.84■■□□□ 1.89
PDE1AP54750 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
PDE1AP54750 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE1AP54750 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.84■■□□□ 1.89
PDE1AP54750 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDE1AP54750 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDE1AP54750 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDE1AP54750 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDE1AP54750 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDE1AP54750 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.83■■□□□ 1.89
PDE1AP54750 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.83■■□□□ 1.89
PDE1AP54750 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.83■■□□□ 1.89
PDE1AP54750 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDE1AP54750 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDE1AP54750 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
PDE1AP54750 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.82■■□□□ 1.88
PDE1AP54750 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
PDE1AP54750 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.82■■□□□ 1.88
PDE1AP54750 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.82■■□□□ 1.88
PDE1AP54750 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PDE1AP54750 AC010525.1-201ENST00000585559 441 ntBASIC26.82■■□□□ 1.88
PDE1AP54750 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDE1AP54750 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PDE1AP54750 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.81■■□□□ 1.88
PDE1AP54750 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
PDE1AP54750 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.81■■□□□ 1.88
PDE1AP54750 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.81■■□□□ 1.88
PDE1AP54750 AC011298.3-201ENST00000615796 283 ntBASIC26.81■■□□□ 1.88
PDE1AP54750 AC136469.2-201ENST00000623944 1028 ntBASIC26.81■■□□□ 1.88
PDE1AP54750 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDE1AP54750 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDE1AP54750 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.8■■□□□ 1.88
PDE1AP54750 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDE1AP54750 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
PDE1AP54750 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
PDE1AP54750 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.8■■□□□ 1.88
PDE1AP54750 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
PDE1AP54750 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PDE1AP54750 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDE1AP54750 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDE1AP54750 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDE1AP54750 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDE1AP54750 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PDE1AP54750 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.79■■□□□ 1.88
PDE1AP54750 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PDE1AP54750 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.79■■□□□ 1.88
PDE1AP54750 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDE1AP54750 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PDE1AP54750 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDE1AP54750 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.79■■□□□ 1.88
PDE1AP54750 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PDE1AP54750 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDE1AP54750 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.78■■□□□ 1.88
PDE1AP54750 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PDE1AP54750 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms