Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.13■□□□□ 0.97
CLCN2P51788 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN2P51788 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN2P51788 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN2P51788 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.13■□□□□ 0.97
CLCN2P51788 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CLCN2P51788 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCN2P51788 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CLCN2P51788 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN2P51788 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN2P51788 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCN2P51788 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN2P51788 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.12■□□□□ 0.97
CLCN2P51788 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.12■□□□□ 0.97
CLCN2P51788 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCN2P51788 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN2P51788 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCN2P51788 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN2P51788 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLCN2P51788 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN2P51788 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN2P51788 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLCN2P51788 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLCN2P51788 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.11■□□□□ 0.97
CLCN2P51788 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CLCN2P51788 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN2P51788 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN2P51788 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN2P51788 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN2P51788 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN2P51788 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CLCN2P51788 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN2P51788 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CLCN2P51788 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN2P51788 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLCN2P51788 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CLCN2P51788 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN2P51788 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLCN2P51788 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLCN2P51788 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.09■□□□□ 0.97
CLCN2P51788 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLCN2P51788 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLCN2P51788 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CLCN2P51788 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLCN2P51788 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLCN2P51788 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN2P51788 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN2P51788 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN2P51788 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN2P51788 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN2P51788 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.08■□□□□ 0.97
CLCN2P51788 SRD5A1P1-201ENST00000442297 786 ntBASIC21.08■□□□□ 0.97
CLCN2P51788 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN2P51788 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN2P51788 C11orf96-202ENST00000528572 1834 ntBASIC21.08■□□□□ 0.96
CLCN2P51788 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN2P51788 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN2P51788 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CLCN2P51788 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN2P51788 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN2P51788 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLCN2P51788 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CLCN2P51788 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN2P51788 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN2P51788 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CLCN2P51788 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN2P51788 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN2P51788 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN2P51788 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.07■□□□□ 0.96
CLCN2P51788 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN2P51788 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN2P51788 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN2P51788 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN2P51788 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN2P51788 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCN2P51788 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN2P51788 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCN2P51788 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN2P51788 AC073130.3-201ENST00000624389 2278 ntBASIC21.05■□□□□ 0.96
CLCN2P51788 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.05■□□□□ 0.96
CLCN2P51788 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.05■□□□□ 0.96
CLCN2P51788 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms