Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC6A9P48067 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A9P48067 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A9P48067 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A9P48067 AL356740.2-201ENST00000601559 647 ntBASIC19.27■□□□□ 0.68
SLC6A9P48067 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A9P48067 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A9P48067 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A9P48067 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.27■□□□□ 0.67
SLC6A9P48067 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC6A9P48067 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A9P48067 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A9P48067 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC6A9P48067 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A9P48067 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC6A9P48067 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A9P48067 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC6A9P48067 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SLC6A9P48067 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A9P48067 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A9P48067 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC6A9P48067 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A9P48067 EP400NL-214ENST00000641289 2402 ntBASIC19.25■□□□□ 0.67
SLC6A9P48067 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A9P48067 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SLC6A9P48067 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A9P48067 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SLC6A9P48067 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A9P48067 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SLC6A9P48067 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A9P48067 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A9P48067 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC6A9P48067 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC6A9P48067 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.24■□□□□ 0.67
SLC6A9P48067 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SLC6A9P48067 AC004687.1-201ENST00000579003 1625 ntBASIC19.24■□□□□ 0.67
SLC6A9P48067 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC6A9P48067 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A9P48067 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC6A9P48067 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC6A9P48067 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC6A9P48067 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC6A9P48067 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A9P48067 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.23■□□□□ 0.67
SLC6A9P48067 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A9P48067 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A9P48067 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A9P48067 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A9P48067 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A9P48067 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A9P48067 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC6A9P48067 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A9P48067 AC008406.3-201ENST00000620001 1374 ntBASIC19.21■□□□□ 0.67
SLC6A9P48067 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A9P48067 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A9P48067 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A9P48067 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A9P48067 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLC6A9P48067 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A9P48067 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A9P48067 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms