Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.83■■□□□ 1.57
CLCN1P35523 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.56
CLCN1P35523 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CLCN1P35523 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
CLCN1P35523 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.82■■□□□ 1.56
CLCN1P35523 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.82■■□□□ 1.56
CLCN1P35523 AC010980.1-201ENST00000587192 1142 ntBASIC24.82■■□□□ 1.56
CLCN1P35523 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.82■■□□□ 1.56
CLCN1P35523 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCN1P35523 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLCN1P35523 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLCN1P35523 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC24.81■■□□□ 1.56
CLCN1P35523 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.81■■□□□ 1.56
CLCN1P35523 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.81■■□□□ 1.56
CLCN1P35523 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLCN1P35523 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.8■■□□□ 1.56
CLCN1P35523 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.8■■□□□ 1.56
CLCN1P35523 AC022616.5-201ENST00000518796 181 ntBASIC24.8■■□□□ 1.56
CLCN1P35523 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.8■■□□□ 1.56
CLCN1P35523 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.8■■□□□ 1.56
CLCN1P35523 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.8■■□□□ 1.56
CLCN1P35523 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.8■■□□□ 1.56
CLCN1P35523 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLCN1P35523 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.8■■□□□ 1.56
CLCN1P35523 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.79■■□□□ 1.56
CLCN1P35523 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.79■■□□□ 1.56
CLCN1P35523 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.79■■□□□ 1.56
CLCN1P35523 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCN1P35523 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.79■■□□□ 1.56
CLCN1P35523 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC24.79■■□□□ 1.56
CLCN1P35523 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN1P35523 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN1P35523 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN1P35523 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN1P35523 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN1P35523 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN1P35523 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.78■■□□□ 1.56
CLCN1P35523 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CLCN1P35523 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.78■■□□□ 1.56
CLCN1P35523 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.77■■□□□ 1.56
CLCN1P35523 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.77■■□□□ 1.56
CLCN1P35523 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLCN1P35523 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CLCN1P35523 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CLCN1P35523 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLCN1P35523 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CLCN1P35523 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.77■■□□□ 1.56
CLCN1P35523 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN1P35523 AC011551.1-201ENST00000614101 683 ntBASIC24.76■■□□□ 1.55
CLCN1P35523 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN1P35523 AC079630.1-202ENST00000618127 1840 ntBASIC24.76■■□□□ 1.55
CLCN1P35523 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN1P35523 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN1P35523 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN1P35523 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.76■■□□□ 1.55
CLCN1P35523 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN1P35523 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.76■■□□□ 1.55
CLCN1P35523 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLCN1P35523 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCN1P35523 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCN1P35523 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CLCN1P35523 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.75■■□□□ 1.55
CLCN1P35523 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CLCN1P35523 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
CLCN1P35523 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.75■■□□□ 1.55
CLCN1P35523 MCC-208ENST00000514701 2855 ntTSL 2 BASIC24.75■■□□□ 1.55
CLCN1P35523 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLCN1P35523 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN1P35523 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN1P35523 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN1P35523 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.74■■□□□ 1.55
CLCN1P35523 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
CLCN1P35523 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN1P35523 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.74■■□□□ 1.55
CLCN1P35523 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN1P35523 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN1P35523 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLCN1P35523 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLCN1P35523 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLCN1P35523 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CLCN1P35523 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CLCN1P35523 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.73■■□□□ 1.55
CLCN1P35523 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.73■■□□□ 1.55
CLCN1P35523 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CLCN1P35523 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms