Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.32■□□□□ 0.68
ERCC1P07992 AC106739.1-201ENST00000617035 715 ntBASIC19.32■□□□□ 0.68
ERCC1P07992 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC1P07992 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC1P07992 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC1P07992 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 AC135279.3-201ENST00000610945 1311 ntBASIC19.31■□□□□ 0.68
ERCC1P07992 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.31■□□□□ 0.68
ERCC1P07992 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.31■□□□□ 0.68
ERCC1P07992 AL136162.1-201ENST00000607711 1078 ntBASIC19.31■□□□□ 0.68
ERCC1P07992 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.31■□□□□ 0.68
ERCC1P07992 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.31■□□□□ 0.68
ERCC1P07992 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC1P07992 SYT6-210ENST00000641643 1587 ntBASIC19.31■□□□□ 0.68
ERCC1P07992 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.31■□□□□ 0.68
ERCC1P07992 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ERCC1P07992 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ERCC1P07992 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ERCC1P07992 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ERCC1P07992 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC1P07992 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC1P07992 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC1P07992 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC1P07992 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC1P07992 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC1P07992 AC005837.3-201ENST00000612163 286 ntBASIC19.3■□□□□ 0.68
ERCC1P07992 AC241377.3-202ENST00000626088 1088 ntBASIC19.3■□□□□ 0.68
ERCC1P07992 AC241585.3-202ENST00000628937 1088 ntBASIC19.3■□□□□ 0.68
ERCC1P07992 AC245100.8-202ENST00000629247 1058 ntBASIC19.3■□□□□ 0.68
ERCC1P07992 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC1P07992 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC1P07992 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC1P07992 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC1P07992 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ERCC1P07992 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC1P07992 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC1P07992 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC1P07992 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC1P07992 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC1P07992 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC1P07992 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC1P07992 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ERCC1P07992 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ERCC1P07992 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC1P07992 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.29■□□□□ 0.68
ERCC1P07992 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ERCC1P07992 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC1P07992 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC1P07992 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC1P07992 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.29■□□□□ 0.68
ERCC1P07992 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ERCC1P07992 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ERCC1P07992 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
ERCC1P07992 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.28■□□□□ 0.68
ERCC1P07992 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ERCC1P07992 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.28■□□□□ 0.68
ERCC1P07992 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ERCC1P07992 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERCC1P07992 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ERCC1P07992 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.27■□□□□ 0.68
ERCC1P07992 AC142381.2-201ENST00000566120 298 ntBASIC19.27■□□□□ 0.68
ERCC1P07992 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ERCC1P07992 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ERCC1P07992 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERCC1P07992 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERCC1P07992 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERCC1P07992 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.26■□□□□ 0.67
ERCC1P07992 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
ERCC1P07992 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.26■□□□□ 0.67
ERCC1P07992 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERCC1P07992 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms