Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND1P03886 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND1P03886 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND1P03886 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND1P03886 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND1P03886 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND1P03886 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND1P03886 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND1P03886 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MT-ND1P03886 AL033527.3-201ENST00000566366 1196 ntBASIC20.61■□□□□ 0.89
MT-ND1P03886 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND1P03886 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.61■□□□□ 0.89
MT-ND1P03886 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.61■□□□□ 0.89
MT-ND1P03886 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND1P03886 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MT-ND1P03886 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND1P03886 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND1P03886 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND1P03886 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND1P03886 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND1P03886 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.6■□□□□ 0.89
MT-ND1P03886 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND1P03886 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MT-ND1P03886 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.6■□□□□ 0.89
MT-ND1P03886 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND1P03886 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MT-ND1P03886 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND1P03886 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND1P03886 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MT-ND1P03886 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
MT-ND1P03886 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND1P03886 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND1P03886 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND1P03886 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND1P03886 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND1P03886 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND1P03886 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND1P03886 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.58■□□□□ 0.89
MT-ND1P03886 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
MT-ND1P03886 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
MT-ND1P03886 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND1P03886 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND1P03886 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.58■□□□□ 0.89
MT-ND1P03886 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.58■□□□□ 0.88
MT-ND1P03886 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND1P03886 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.57■□□□□ 0.88
MT-ND1P03886 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND1P03886 AC004448.1-201ENST00000458332 883 ntBASIC20.57■□□□□ 0.88
MT-ND1P03886 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND1P03886 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND1P03886 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
MT-ND1P03886 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MT-ND1P03886 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.57■□□□□ 0.88
MT-ND1P03886 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND1P03886 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND1P03886 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
MT-ND1P03886 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.56■□□□□ 0.88
MT-ND1P03886 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND1P03886 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
MT-ND1P03886 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.56■□□□□ 0.88
MT-ND1P03886 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND1P03886 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND1P03886 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND1P03886 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.56■□□□□ 0.88
MT-ND1P03886 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
MT-ND1P03886 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.55■□□□□ 0.88
MT-ND1P03886 AC103834.1-201ENST00000520383 144 ntBASIC20.55■□□□□ 0.88
MT-ND1P03886 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.55■□□□□ 0.88
MT-ND1P03886 AC144652.1-201ENST00000609974 1624 ntBASIC20.55■□□□□ 0.88
MT-ND1P03886 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MT-ND1P03886 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.55■□□□□ 0.88
MT-ND1P03886 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND1P03886 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MT-ND1P03886 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND1P03886 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.54■□□□□ 0.88
MT-ND1P03886 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND1P03886 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MT-ND1P03886 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND1P03886 AC073130.3-201ENST00000624389 2278 ntBASIC20.54■□□□□ 0.88
MT-ND1P03886 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND1P03886 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
MT-ND1P03886 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.53■□□□□ 0.88
MT-ND1P03886 YBX1P4-201ENST00000392794 808 ntBASIC20.53■□□□□ 0.88
MT-ND1P03886 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MT-ND1P03886 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND1P03886 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms