Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.43■■□□□ 1.18
MT-CO1P00395 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
MT-CO1P00395 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-CO1P00395 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.43■■□□□ 1.18
MT-CO1P00395 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.43■■□□□ 1.18
MT-CO1P00395 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-CO1P00395 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
MT-CO1P00395 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.43■■□□□ 1.18
MT-CO1P00395 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.43■■□□□ 1.18
MT-CO1P00395 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-CO1P00395 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.43■■□□□ 1.18
MT-CO1P00395 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.42■■□□□ 1.18
MT-CO1P00395 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-CO1P00395 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
MT-CO1P00395 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-CO1P00395 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-CO1P00395 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.42■■□□□ 1.18
MT-CO1P00395 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.42■■□□□ 1.18
MT-CO1P00395 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
MT-CO1P00395 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-CO1P00395 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-CO1P00395 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
MT-CO1P00395 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO1P00395 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO1P00395 IRS3P-201ENST00000223076 1006 ntBASIC22.41■■□□□ 1.18
MT-CO1P00395 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
MT-CO1P00395 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.41■■□□□ 1.18
MT-CO1P00395 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.41■■□□□ 1.18
MT-CO1P00395 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO1P00395 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO1P00395 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO1P00395 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.41■■□□□ 1.18
MT-CO1P00395 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO1P00395 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-CO1P00395 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.41■■□□□ 1.18
MT-CO1P00395 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO1P00395 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.4■■□□□ 1.18
MT-CO1P00395 AC012676.1-201ENST00000574705 1949 ntBASIC22.4■■□□□ 1.18
MT-CO1P00395 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
MT-CO1P00395 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO1P00395 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO1P00395 IGHV3-19-201ENST00000521488 291 ntBASIC22.4■■□□□ 1.18
MT-CO1P00395 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.4■■□□□ 1.18
MT-CO1P00395 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.4■■□□□ 1.18
MT-CO1P00395 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
MT-CO1P00395 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
MT-CO1P00395 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-CO1P00395 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.39■■□□□ 1.18
MT-CO1P00395 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
MT-CO1P00395 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.18
MT-CO1P00395 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MT-CO1P00395 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
MT-CO1P00395 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MT-CO1P00395 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO1P00395 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.38■■□□□ 1.17
MT-CO1P00395 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.38■■□□□ 1.17
MT-CO1P00395 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO1P00395 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO1P00395 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO1P00395 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.38■■□□□ 1.17
MT-CO1P00395 AP005435.1-201ENST00000529293 1178 ntBASIC22.38■■□□□ 1.17
MT-CO1P00395 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.38■■□□□ 1.17
MT-CO1P00395 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO1P00395 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
MT-CO1P00395 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MT-CO1P00395 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO1P00395 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO1P00395 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.37■■□□□ 1.17
MT-CO1P00395 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.37■■□□□ 1.17
MT-CO1P00395 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.37■■□□□ 1.17
MT-CO1P00395 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.37■■□□□ 1.17
MT-CO1P00395 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
MT-CO1P00395 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO1P00395 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MT-CO1P00395 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.36■■□□□ 1.17
MT-CO1P00395 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO1P00395 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO1P00395 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MT-CO1P00395 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.36■■□□□ 1.17
MT-CO1P00395 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
MT-CO1P00395 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.36■■□□□ 1.17
MT-CO1P00395 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
MT-CO1P00395 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MT-CO1P00395 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MT-CO1P00395 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MT-CO1P00395 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MT-CO1P00395 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MT-CO1P00395 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.35■■□□□ 1.17
MT-CO1P00395 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
MT-CO1P00395 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.35■■□□□ 1.17
MT-CO1P00395 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.35■■□□□ 1.17
MT-CO1P00395 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.35■■□□□ 1.17
MT-CO1P00395 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.35■■□□□ 1.17
MT-CO1P00395 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.35■■□□□ 1.17
MT-CO1P00395 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MT-CO1P00395 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO1P00395 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO1P00395 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
MT-CO1P00395 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
MT-CO1P00395 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms