Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC3O95833 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC3O95833 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLIC3O95833 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.2■□□□□ 0.82
CLIC3O95833 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.2■□□□□ 0.82
CLIC3O95833 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CLIC3O95833 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLIC3O95833 AC244015.2-201ENST00000616358 1861 ntBASIC20.2■□□□□ 0.82
CLIC3O95833 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CLIC3O95833 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLIC3O95833 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CLIC3O95833 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLIC3O95833 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLIC3O95833 AC133552.2-201ENST00000619106 1032 ntBASIC20.19■□□□□ 0.82
CLIC3O95833 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC3O95833 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLIC3O95833 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.19■□□□□ 0.82
CLIC3O95833 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.19■□□□□ 0.82
CLIC3O95833 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC3O95833 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC3O95833 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC3O95833 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC3O95833 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CLIC3O95833 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CLIC3O95833 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 AC087393.1-201ENST00000582896 145 ntBASIC20.18■□□□□ 0.82
CLIC3O95833 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CLIC3O95833 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.18■□□□□ 0.82
CLIC3O95833 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC3O95833 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC3O95833 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC3O95833 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.17■□□□□ 0.82
CLIC3O95833 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC3O95833 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC3O95833 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
CLIC3O95833 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.17■□□□□ 0.82
CLIC3O95833 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC3O95833 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLIC3O95833 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLIC3O95833 SPCS2P3-201ENST00000500401 656 ntBASIC20.17■□□□□ 0.82
CLIC3O95833 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLIC3O95833 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.17■□□□□ 0.82
CLIC3O95833 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.17■□□□□ 0.82
CLIC3O95833 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLIC3O95833 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC3O95833 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLIC3O95833 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC3O95833 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC3O95833 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CLIC3O95833 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC3O95833 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLIC3O95833 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CLIC3O95833 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
CLIC3O95833 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.15■□□□□ 0.82
CLIC3O95833 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CLIC3O95833 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLIC3O95833 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.15■□□□□ 0.82
CLIC3O95833 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLIC3O95833 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLIC3O95833 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLIC3O95833 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLIC3O95833 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.14■□□□□ 0.81
CLIC3O95833 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC3O95833 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC3O95833 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC3O95833 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CLIC3O95833 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC3O95833 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC3O95833 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLIC3O95833 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms