Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC29.5■■■□□ 2.31
LTN1O94822 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
LTN1O94822 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.5■■■□□ 2.31
LTN1O94822 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC29.49■■■□□ 2.31
LTN1O94822 AC104771.1-201ENST00000603335 964 ntBASIC29.49■■■□□ 2.31
LTN1O94822 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC29.49■■■□□ 2.31
LTN1O94822 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC29.49■■■□□ 2.31
LTN1O94822 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
LTN1O94822 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
LTN1O94822 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
LTN1O94822 AL353803.4-201ENST00000565882 1934 ntBASIC29.48■■■□□ 2.31
LTN1O94822 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
LTN1O94822 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.48■■■□□ 2.31
LTN1O94822 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LTN1O94822 KRT19P1-201ENST00000405746 1186 ntBASIC29.48■■■□□ 2.31
LTN1O94822 GXYLT1P5-201ENST00000614548 1189 ntBASIC29.48■■■□□ 2.31
LTN1O94822 BID-214ENST00000617586 542 ntTSL 5 BASIC29.48■■■□□ 2.31
LTN1O94822 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
LTN1O94822 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
LTN1O94822 AL139125.2-201ENST00000623134 1869 ntBASIC29.48■■■□□ 2.31
LTN1O94822 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.47■■■□□ 2.31
LTN1O94822 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC29.47■■■□□ 2.31
LTN1O94822 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
LTN1O94822 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LTN1O94822 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC29.47■■■□□ 2.31
LTN1O94822 EMC9-206ENST00000560403 872 ntTSL 2 BASIC29.47■■■□□ 2.31
LTN1O94822 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
LTN1O94822 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
LTN1O94822 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.46■■■□□ 2.31
LTN1O94822 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
LTN1O94822 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LTN1O94822 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
LTN1O94822 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LTN1O94822 CROCCP5-201ENST00000436658 830 ntBASIC29.46■■■□□ 2.31
LTN1O94822 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
LTN1O94822 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.46■■■□□ 2.31
LTN1O94822 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
LTN1O94822 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
LTN1O94822 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
LTN1O94822 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC29.45■■■□□ 2.31
LTN1O94822 CPT2-209ENST00000636935 803 ntTSL 5 BASIC29.45■■■□□ 2.31
LTN1O94822 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.3
LTN1O94822 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LTN1O94822 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC29.44■■■□□ 2.3
LTN1O94822 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTN1O94822 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTN1O94822 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTN1O94822 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC29.44■■■□□ 2.3
LTN1O94822 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LTN1O94822 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LTN1O94822 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC29.43■■■□□ 2.3
LTN1O94822 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC29.42■■■□□ 2.3
LTN1O94822 PPP1R14BP3-201ENST00000509033 445 ntBASIC29.42■■■□□ 2.3
LTN1O94822 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
LTN1O94822 AC005224.4-201ENST00000583262 1652 ntBASIC29.42■■■□□ 2.3
LTN1O94822 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC29.41■■■□□ 2.3
LTN1O94822 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC29.41■■■□□ 2.3
LTN1O94822 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.41■■■□□ 2.3
LTN1O94822 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.41■■■□□ 2.3
LTN1O94822 PREB-202ENST00000406567 1910 ntTSL 5 BASIC29.41■■■□□ 2.3
LTN1O94822 MFSD11-216ENST00000590393 1141 ntBASIC29.41■■■□□ 2.3
LTN1O94822 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
LTN1O94822 KRT87P-202ENST00000534226 1464 ntBASIC29.41■■■□□ 2.3
LTN1O94822 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LTN1O94822 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LTN1O94822 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
LTN1O94822 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
LTN1O94822 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC29.39■■■□□ 2.3
LTN1O94822 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC29.39■■■□□ 2.3
LTN1O94822 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
LTN1O94822 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
LTN1O94822 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC29.39■■■□□ 2.29
LTN1O94822 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LTN1O94822 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC29.38■■■□□ 2.29
LTN1O94822 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.38■■■□□ 2.29
LTN1O94822 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LTN1O94822 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LTN1O94822 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC29.38■■■□□ 2.29
LTN1O94822 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC29.38■■■□□ 2.29
LTN1O94822 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LTN1O94822 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC29.37■■■□□ 2.29
LTN1O94822 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LTN1O94822 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC29.37■■■□□ 2.29
LTN1O94822 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LTN1O94822 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC29.37■■■□□ 2.29
LTN1O94822 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC29.37■■■□□ 2.29
LTN1O94822 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC29.37■■■□□ 2.29
LTN1O94822 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LTN1O94822 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC29.36■■■□□ 2.29
LTN1O94822 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LTN1O94822 AL355802.2-201ENST00000402069 882 ntBASIC29.36■■■□□ 2.29
LTN1O94822 AL050303.2-201ENST00000619798 666 ntBASIC29.36■■■□□ 2.29
LTN1O94822 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms